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2017 GTC San Jose

S7341 - Using OpenACC for NGS Techniques to Create a Portable and Easy-to-Use Code Base

Session Speakers
Session Description

Happy with your code but re-writing every time a hardware platform changes? Know NVIDIA CUDA but want to use a higher-level programming model? OpenACC is a directive-based technique that enables more science and less programming. The model facilitates reusing code base on more than one platform. This session will help you: (1) Learn how to incrementally improve a bioinformatics code base using OpenACC without losing performance (2) Explore how to apply optimization techniques and the challenges encountered in the process. We'll share our experience using OpenACC for DNA Next Generation Sequencing techniques.


Additional Session Information
Intermediate
Talk
Computational Biology Performance Optimization Programming Languages
Healthcare & Life Sciences Higher Education / Research Software
25 minutes
Session Schedule